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emstech.org

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Scopus Author ID: 35412807400

Keywords

nematodes, genomics

Countries

United States

Activities

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Employment (5)

Cornell University: Ithaca, NY, US

2017-10-16 to present | Assistant Research Professor (Molecular Biology and Genetics)
Employment
Source: Self-asserted source
Erich M. Schwarz

Cornell University: Ithaca, NY, US

2016-11-01 to 2017-10-15 | Research Scientist (Molecular Biology and Genetics)
Employment
Source: Self-asserted source
Erich M. Schwarz

Cornell University: Ithaca, NY, US

2013-01-01 to 2016-10-31 | Senior Research Associate (Molecular Biology and Genetics)
Employment
Source: Self-asserted source
Erich M. Schwarz

California Institute of Technology: Pasadena, CA, US

2000-03-01 to 2012-12-31 | Associate Biologist (Biology)
Employment
Source: Self-asserted source
Erich M. Schwarz

Columbia University: New York, NY, US

1995-10-15 to 2000-02-29 | Postdoctoral Fellow (Biological Sciences)
Employment
Source: Self-asserted source
Erich M. Schwarz

Education and qualifications (2)

California Institute of Technology: Pasadena, CA, US

1986-10-01 to 1995-08-21 | Ph.D. (Biology)
Education
Source: Self-asserted source
Erich M. Schwarz

Harvard University: Cambridge, MA, US

1981-10-01 to 1986-06-01 | A.B. (Biochemistry and Molecular Biology)
Education
Source: Self-asserted source
Erich M. Schwarz

Professional activities (2)

University of Melbourne: Melbourne, Victoria, AU

2019-05-25 to present | Honorary Senior Fellow (Faculty of Veterinary Biosciences)
Invited position
Source: Self-asserted source
Erich M. Schwarz

University of Melbourne: Melbourne, Victoria, AU

2011-05-25 to 2019-05-24 | Honorary Fellow (Faculty of Veterinary Biosciences)
Invited position
Source: Self-asserted source
Erich M. Schwarz

Funding (1)

Harnessing transcriptomics to identify and test novel hookworm vaccine targets.

2015-05 to 2017-04 | Award
National Institute of Allergy and Infectious Diseases (MD, MD, US)
GRANT_NUMBER:

R21AI111173
Source: Self-asserted source
Erich M. Schwarz

Research resources (1)

Third-generation genomic analysis of nematode evolution and ecology: parasitic nematodes, hermaphroditic nematodes, and nematode predators of insects

Works (49)

Hookworm genes encoding intestinal excreted-secreted proteins are transcriptionally upregulated in response to the host’s immune system

2025-02-03 | Preprint
DOI: 10.1101/2025.02.01.636063
Contributors: Erich M. Schwarz; Jason B. Noon; Jeffrey D. Chicca; Carli Garceau; Hanchen Li; Igor Antoshechkin; Vladislav Ilík; Barbora Pafčo; Amy M. Weeks; E. Jane Homan et al.
Source: check_circle
Crossref

Genomes of the entomopathogenic nematodeSteinernema hermaphroditumand its associated bacteria

2025-01-12 | Preprint
DOI: 10.1101/2025.01.09.632278
Contributors: Erich M. Schwarz; Anil Baniya; Jennifer K. Heppert; Hillel T. Schwartz; Chieh-Hsiang Tan; Igor Antoshechkin; Paul W. Sternberg; Heidi Goodrich-Blair; Adler R. Dillman
Source: check_circle
Crossref

Robust sex determination in the Caenorhabditis nigoni germ line

GENETICS
2024-12-12 | Journal article
DOI: 10.1093/genetics/iyae207
Contributors: Jonathan P Harbin; Yongquan Shen; Shin-Yi Lin; Kevin Kemper; Eric S Haag; Erich M Schwarz; Ronald E Ellis; B Conradt
Source: check_circle
Crossref

Hookworm genomics: dusk or dawn?

Trends in Parasitology
2024-06 | Journal article
DOI: 10.1016/j.pt.2024.04.003
Contributors: Vladislav Ilík; Erich M. Schwarz; Eva Nosková; Barbora Pafčo
Source: check_circle
Crossref

Transcriptomic profiling of sex-specific olfactory neurons reveals subset-specific receptor expression inCaenorhabditis elegans

2021-10-28 | Preprint
DOI: 10.1101/2021.10.26.465928
Contributors: Douglas K. Reilly; Erich M. Schwarz; Caroline S. Muirhead; Annalise N. Robidoux; Anusha Narayan; Meenakshi K. Doma; Paul W. Sternberg; Jagan Srinivasan
Source: check_circle
Crossref

Genome sequence of the oyster mushroom Pleurotus ostreatus strain PC9

G3
2021-02-09 | Journal article
DOI: 10.1093/g3journal/jkaa008
Contributors: Yi-Yun Lee; Guillermo Vidal-Diez de Ulzurrun; Erich M Schwarz; Jason E Stajich; Yen-Ping Hsueh; A Rokas
Source: check_circle
Crossref

Genomic analyses of two Italian oyster mushroom Pleurotus pulmonarius strains

G3
2021-02-09 | Journal article
DOI: 10.1093/g3journal/jkaa007
Contributors: Guillermo Vidal-Diez de Ulzurrun; Yi-Yun Lee; Jason E Stajich; Erich M Schwarz; Yen-Ping Hsueh; J Dunlap
Source: check_circle
Crossref

Genome sequence of the oyster mushroomPleurotus ostreatusstrain PC9

2020-09-04 | Preprint
DOI: 10.1101/2020.09.03.281683
Contributors: Yi-Yun Lee; Guillermo Vidal-Diez de Ulzurrun; Erich M. Schwarz; Jason E. Stajich; Yen-Ping Hsueh
Source: check_circle
Crossref

Genomic analyses of two Italian oyster mushroomPleurotus pulmonariusstrains

2020-09-03 | Preprint
DOI: 10.1101/2020.09.03.281089
Contributors: Guillermo Vidal-Diez de Ulzurrun; Yi-Yun Lee; Jason E. Stajich; Erich M. Schwarz; Yen-Ping Hsueh
Source: check_circle
Crossref

Robust organ size requires robust timing of initiation orchestrated by focused auxin and cytokinin signalling

Nature Plants
2020-05-25 | Journal article
DOI: 10.1038/s41477-020-0666-7
Contributors: Mingyuan Zhu; Weiwei Chen; Vincent Mirabet; Lilan Hong; Simone Bovio; Soeren Strauss; Erich M. Schwarz; Satoru Tsugawa; Zhou Wang; Richard S. Smith et al.
Source: check_circle
Crossref

Timing of organ initiation is crucial for robust organ size

2020-03-10 | Preprint
DOI: 10.1101/2020.03.08.982629
Contributors: Mingyuan Zhu; Weiwei Chen; Vincent Mirabet; Lilan Hong; Simone Bovio; Soeren Strauss; Erich M. Schwarz; Satoru Tsugawa; Zhou Wang; Richard S. Smith et al.
Source: check_circle
Crossref

Recompleting the Caenorhabditis elegans genome.

Genome research
2019-05-23 | Journal article
DOI: 10.1101/gr.244830.118
PMID: 31123080
PMC: PMC6581061
Source: Self-asserted source
Erich M. Schwarz

A highly expressed intestinal cysteine protease of Ancylostoma ceylanicum protects vaccinated hamsters from hookworm infection

PLOS Neglected Tropical Diseases
2019-04-22 | Journal article
DOI: 10.1371/journal.pntd.0007345
Contributors: Jason B. Noon; Timothy G. Geary; Erich M. Schwarz; Gary R. Ostroff; Raffi V. Aroian
Source: check_circle
Crossref

The Long Non-Coding RNA lep-5 Promotes the Juvenile-to-Adult Transition by Destabilizing LIN-28.

Developmental Cell
2019-04-02 | Journal article
DOI: 10.1016/j.devcel.2019.03.003
PMID: 30956008
Source: Self-asserted source
Erich M. Schwarz

Rapid genome shrinkage in a self-fertile nematode reveals sperm competition proteins

Science
2018-01-05 | Journal article
DOI: 10.1126/science.aao0827
Contributors: Da Yin; Erich M. Schwarz; Cristel G. Thomas; Rebecca L. Felde; Ian F. Korf; Asher D. Cutter; Caitlin M. Schartner; Edward J. Ralston; Barbara J. Meyer; Eric S. Haag
Source: check_circle
Crossref

Evolution: a parthenogenetic nematode shows how animals become sexless

Current Biology
2017-10-09 | Journal article
PMID: 29017041
Source: Self-asserted source
Erich M. Schwarz

cGAL, a temperature-robust GAL4–UAS system for Caenorhabditis elegans

Nature Methods
2017-02-19 | Journal article
DOI: 10.1038/nmeth.4109
Contributors: Han Wang; Jonathan Liu; Shahla Gharib; Cynthia M Chai; Erich M Schwarz; Navin Pokala; Paul W Sternberg
Source: check_circle
Crossref

Nematophagous fungus Arthrobotrys oligospora mimics olfactory cues of sex and food to lure its nematode prey.

2017-01 | Journal article
DOI: 10.7554/elife.20023
PMID: 28098555
PMC: PMC5243009
Contributors: Hsueh YP; Gronquist MR; Schwarz EM; Nath RD; Lee CH; Gharib S; Schroeder FC; Sternberg PW
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Understanding Haemonchus contortus Better Through Genomics and Transcriptomics.

2016 | Journal article
DOI: 10.1016/bs.apar.2016.02.015
PMID: 27238012
Contributors: Gasser RB; Schwarz EM; Korhonen PK; Young ND
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

C. elegans Stress-Induced Sleep Emerges from the Collective Action of Multiple Neuropeptides.

2016-09 | Journal article
DOI: 10.1016/j.cub.2016.07.048
PMID: 27546573
Contributors: Nath RD; Chow ES; Wang H; Schwarz EM; Sternberg PW
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

The tubulin repertoire of C. elegans sensory neurons and its context-dependent role in process outgrowth.

2016-09 | Journal article
PMID: 27654945
Contributors: Lockhead D; Schwarz EM; O'Hagan R; Bellotti S; Krieg M; Barr MM; Dunn AR; Sternberg PW; Goodman MB
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

The khmer software package: enabling efficient nucleotide sequence analysis [version 1; referees: awaiting peer review]

2015-09-25 | Journal article
DOI: 10.12688/f1000research.6924.1
Contributors: Michael R. Crusoe; Hussien F. Alameldin; Sherine Awad; Elmar Boucher; Adam Caldwell; Reed Cartwright; Amanda Charbonneau; Bede Constantinides; Greg Edvenson; Scott Fay et al.
Source: check_circle
F1000

Promotion of bone morphogenetic protein signaling by tetraspanins and glycosphingolipids.

2015-05 | Journal article
DOI:

10.1371/journal.pgen.1005221

PMID:

25978409
Contributors: Liu Z; Shi H; Szymczak LC; Aydin T; Yun S; Constas K; Schaeffer A; Ranjan S; Kubba S; Alam E et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

The genome and transcriptome of the zoonotic hookworm Ancylostoma ceylanicum identify infection-specific gene families.

2015-04 | Journal article
DOI:

10.1038/ng.3237

PMID:

25730766
Contributors: Schwarz EM; Hu Y; Antoshechkin I; Miller MM; Sternberg PW; Aroian RV
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Genome and transcriptome of the porcine whipworm Trichuris suis.

2014-07 | Journal article
DOI:

10.1038/ng.3012

PMID:

24929829

PMC:

PMC4105696
Contributors: Jex AR; Nejsum P; Schwarz EM; Hu L; Young ND; Hall RS; Korhonen PK; Liao S; Thamsborg S; Xia J et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Identification of DVA interneuron regulatory sequences in Caenorhabditis elegans.

2013 | Journal article
DOI:

10.1371/journal.pone.0054971

PMID:

23383017

PMC:

PMC3557239
Contributors: Puckett Robinson C; Schwarz EM; Sternberg PW
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus.

2013 | Journal article
DOI:

10.1186/gb-2013-14-8-r89

PMID:

23985341

PMC:

PMC4053716
Contributors: Schwarz EM; Korhonen PK; Campbell BE; Young ND; Jex AR; Jabbar A; Hall RS; Mondal A; Howe AC; Pell J et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Cephalopod genomics: A plan of strategies and organization.

2012-10 | Journal article
DOI:

10.4056/sigs.3136559

PMID:

23451296

PMC:

PMC3570802
Contributors: Albertin CB; Bonnaud L; Brown CT; Crookes-Goodson WJ; da Fonseca RR; Di Cristo C; Dilkes BP; Edsinger-Gonzales E; Freeman RM Jr; Hanlon RT et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Functional transcriptomics of a migrating cell in Caenorhabditis elegans.

2012-10 | Journal article
DOI:

10.1073/pnas.1203045109

PMID:

22991463

PMC:

PMC3479585
Contributors: Schwarz EM; Kato M; Sternberg PW
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

WormBase 2012: more genomes, more data, new website.

2012-01 | Journal article
DOI:

10.1093/nar/gkr954

PMID:

22067452

PMC:

PMC3245152
Contributors: Yook K; Harris TW; Bieri T; Cabunoc A; Chan J; Chen WJ; Davis P; de la Cruz N; Duong A; Fang R et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Ascaris suum draft genome.

2011-11 | Journal article
DOI:

10.1038/nature10553

PMID:

22031327
Contributors: Jex AR; Liu S; Li B; Young ND; Hall RS; Li Y; Yang L; Zeng N; Xu X; Xiong Z et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Scaffolding a Caenorhabditis nematode genome with RNA-seq.

2010-12 | Journal article
DOI:

10.1101/gr.111021.110

PMID:

20980554

PMC:

PMC2990000
Contributors: Mortazavi A; Schwarz EM; Williams B; Schaeffer L; Antoshechkin I; Wold BJ; Sternberg PW
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

WormBase: a comprehensive resource for nematode research.

2010-01 | Journal article
DOI:

10.1093/nar/gkp952

PMID:

19910365

PMC:

PMC2808986
Contributors: Harris TW; Antoshechkin I; Bieri T; Blasiar D; Chan J; Chen WJ; De La Cruz N; Davis P; Duesbury M; Fang R et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Multigenome DNA sequence conservation identifies Hox cis-regulatory elements.

2008-12 | Journal article
DOI:

10.1101/gr.085472.108

PMID:

18981268

PMC:

PMC2593573
Contributors: Kuntz SG; Schwarz EM; DeModena JA; De Buysscher T; Trout D; Shizuya H; Sternberg PW; Wold BJ
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

WormBase 2007.

2008-01 | Journal article
DOI:

10.1093/nar/gkm975

PMID:

17991679

PMC:

PMC2238927
Contributors: Rogers A; Antoshechkin I; Bieri T; Blasiar D; Bastiani C; Canaran P; Chan J; Chen WJ; Davis P; Fernandes J et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

WormBase: new content and better access.

2007-01 | Journal article
DOI:

10.1093/nar/gkl818

PMID:

17099234

PMC:

PMC1669750
Contributors: Bieri T; Blasiar D; Ozersky P; Antoshechkin I; Bastiani C; Canaran P; Chan J; Chen N; Chen WJ; Davis P et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Genetic interactions among cortical malformation genes that influence susceptibility to convulsions in C. elegans.

2006-11 | Journal article
DOI:

10.1016/j.brainres.2006.08.067

PMID:

16996038
Contributors: Locke CJ; Williams SN; Schwarz EM; Caldwell GA; Caldwell KA
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Searching WormBase for information about Caenorhabditis elegans.

2006-07 | Journal article
DOI:

10.1002/0471250953.bi0108s14

PMID:

18428757
Contributors: Schwarz EM; Sternberg PW
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Aminoacyl-transferases and the N-end rule pathway of prokaryotic/eukaryotic specificity in a human pathogen.

2006-02 | Journal article
DOI:

10.1073/pnas.0511224103

PMID:

16492767

PMC:

PMC1413915
Contributors: Graciet E; Hu RG; Piatkov K; Rhee JH; Schwarz EM; Varshavsky A
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

WormBase: better software, richer content.

2006-01 | Journal article
DOI:

10.1093/nar/gkj061

PMID:

16381915

PMC:

PMC1347424
Contributors: Schwarz EM; Antoshechkin I; Bastiani C; Bieri T; Blasiar D; Canaran P; Chan J; Chen N; Chen WJ; Davis P et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Genomic classification of protein-coding gene families.

2005 | Journal article
PMID:

18023117
Contributors: Schwarz EM
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

WormBase: a comprehensive data resource for Caenorhabditis biology and genomics.

2005-01 | Journal article
DOI:

10.1093/nar/gki066

PMID:

15608221

PMC:

PMC540020
Contributors: Chen N; Harris TW; Antoshechkin I; Bastiani C; Bieri T; Blasiar D; Bradnam K; Canaran P; Chan J; Chen CK et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

The Gene Ontology (GO) database and informatics resource.

2004-01 | Journal article
PMID:

14681407

PMC:

PMC308770
Contributors: Harris MA; Clark J; Ireland A; Lomax J; Ashburner M; Foulger R; Eilbeck K; Lewis S; Marshall B; Mungall C et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

WormBase: a multi-species resource for nematode biology and genomics.

2004-01 | Journal article
DOI:

10.1093/nar/gkh066

PMID:

14681445

PMC:

PMC308800
Contributors: Harris TW; Chen N; Cunningham F; Tello-Ruiz M; Antoshechkin I; Bastiani C; Bieri T; Blasiar D; Bradnam K; Chan J et al.
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Transducing touch in Caenorhabditis elegans.

2003 | Journal article
DOI:

10.1146/annurev.physiol.65.092101.142659

PMID:

12524464
Contributors: Goodman MB; Schwarz EM
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Calx, a Na-Ca exchanger gene of Drosophila melanogaster.

1997-09 | Journal article
DOI:

10.1073/pnas.94.19.10249

PMID:

9294196

PMC:

PMC23348
Contributors: Schwarz EM; Benzer S
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Anomalous regulation of the Drosophila Na(+)-Ca2+ exchanger by Ca2+.

1996-07 | Journal article
DOI:

10.1085/jgp.108.1.67

PMID:

8817385

PMC:

PMC2229296
Contributors: Hryshko LV; Matsuoka S; Nicoll DA; Weiss JN; Schwarz EM; Benzer S; Philipson KD
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Genetic interactions of modifier genes and modifiable alleles in Drosophila melanogaster.

1988-06 | Journal article
PMID:

2840337

PMC:

PMC1203421
Contributors: Rutledge BJ; Mortin MA; Schwarz E; Thierry-Mieg D; Meselson M
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Analysis of membrane and surface protein sequences with the hydrophobic moment plot.

1984-10 | Journal article
DOI:

10.1016/0022-2836(84)90309-7

PMID:

6502707
Contributors: Eisenberg D; Schwarz E; Komaromy M; Wall R
Source: Self-asserted source
Erich M. Schwarz via Europe PubMed Central

Peer review (4 reviews for 4 publications/grants)

Review activity for Communications biology. (1)
Review activity for PLoS computational biology. (1)
Review activity for PloS one. (1)
Review activity for PLOS pathogens : (1)
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